3D structure

PDB id
6XIQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress
Experimental method
ELECTRON MICROSCOPY
Resolution
4.2 Å

Loop

Sequence
GGUGCA*UGCC
Length
10 nucleotides
Bulged bases
6XIQ|1|2|G|1273, 6XIQ|1|2|C|1274
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6XIQ|1|2|G|1270
6XIQ|1|2|G|1271
6XIQ|1|2|U|1272
6XIQ|1|2|G|1273
6XIQ|1|2|C|1274
6XIQ|1|2|A|1275
*
6XIQ|1|2|U|1437
6XIQ|1|2|G|1438
6XIQ|1|2|C|1439
6XIQ|1|2|C|1440

Current chains

Chain 2
18S ribosomal RNA

Nearby chains

Chain AK
RPS20 isoform 1
Chain AZ
Transfer RNA; tRNA
Chain t
RPS3 isoform 1

Coloring options:

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