IL_6XYW_038
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 6XYW|1|1|A|1306
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XYW_038 not in the Motif Atlas
- Homologous match to IL_7RQB_036
- Geometric discrepancy: 0.1838
- The information below is about IL_7RQB_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
6XYW|1|1|C|1147
6XYW|1|1|U|1148
6XYW|1|1|A|1149
6XYW|1|1|A|1150
6XYW|1|1|G|1151
*
6XYW|1|1|C|1303
6XYW|1|1|G|1304
6XYW|1|1|A|1305
6XYW|1|1|A|1306
6XYW|1|1|G|1307
Current chains
- Chain 1
- RNA (2842-MER)
Nearby chains
- Chain 3
- RNA (118-MER)
- Chain AL
- Uncharacterized protein At1g27435/F17L21.30
- Chain Aq
- 50S ribosomal protein L20
- Chain Ar
- 50S ribosomal protein L21, mitochondrial
- Chain Az
- At5g55140
Coloring options: