IL_6XYW_104
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- CUGCG*CUAUACAAG
- Length
- 14 nucleotides
- Bulged bases
- 6XYW|1|1|A|3075
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XYW_104 not in the Motif Atlas
- Homologous match to IL_4WF9_099
- Geometric discrepancy: 0.2132
- The information below is about IL_4WF9_099
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.4
- Basepair signature
- cWW-tSH-tHW-tHS-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
6XYW|1|1|C|2938
6XYW|1|1|U|2939
6XYW|1|1|G|2940
6XYW|1|1|C|2941
6XYW|1|1|G|2942
*
6XYW|1|1|C|3069
6XYW|1|1|U|3070
6XYW|1|1|A|3071
6XYW|1|1|U|3072
6XYW|1|1|A|3073
6XYW|1|1|C|3074
6XYW|1|1|A|3075
6XYW|1|1|A|3076
6XYW|1|1|G|3077
Current chains
- Chain 1
- RNA (2842-MER)
Nearby chains
- Chain Ac
- 50S ribosomal protein L3-2, mitochondrial
- Chain Aj
- At1g01640
Coloring options: