IL_6XYW_105
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- CUAGUAC*GGACUG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XYW_105 not in the Motif Atlas
- Geometric match to IL_7RQB_103
- Geometric discrepancy: 0.2441
- The information below is about IL_7RQB_103
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.1
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
6XYW|1|1|C|2954
6XYW|1|1|U|2955
6XYW|1|1|A|2956
6XYW|1|1|G|2957
6XYW|1|1|U|2958
6XYW|1|1|A|2959
6XYW|1|1|C|2960
*
6XYW|1|1|G|2965
6XYW|1|1|G|2966
6XYW|1|1|A|2967
6XYW|1|1|C|2968
6XYW|1|1|U|2969
6XYW|1|1|G|2970
Current chains
- Chain 1
- RNA (2842-MER)
Nearby chains
- Chain Af
- Putative ribosomal protein L6
- Chain Ak
- 50S ribosomal protein HLP, mitochondrial
Coloring options: