IL_6XYW_112
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- UGGAAG*UGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XYW_112 not in the Motif Atlas
- Homologous match to IL_4WF9_108
- Geometric discrepancy: 0.1696
- The information below is about IL_4WF9_108
- Detailed Annotation
- tHS double platform
- Broad Annotation
- No text annotation
- Motif group
- IL_48489.1
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
6XYW|1|1|U|3121
6XYW|1|1|G|3122
6XYW|1|1|G|3123
6XYW|1|1|A|3124
6XYW|1|1|A|3125
6XYW|1|1|G|3126
*
6XYW|1|1|U|3139
6XYW|1|1|G|3140
6XYW|1|1|A|3141
6XYW|1|1|A|3142
6XYW|1|1|G|3143
Current chains
- Chain 1
- RNA (2842-MER)
Nearby chains
- Chain AM
- At1g73940/F2P9_19
- Chain An
- At5g09770
- Chain Ap
- At1g24240/F3I6_17
Coloring options: