IL_6XYW_154
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- CUGCAU*AUGG
- Length
- 10 nucleotides
- Bulged bases
- 6XYW|1|2|G|1045, 6XYW|1|2|C|1046
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XYW_154 not in the Motif Atlas
- Geometric match to IL_4V88_473
- Geometric discrepancy: 0.2872
- The information below is about IL_4V88_473
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_36174.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
6XYW|1|2|C|1043
6XYW|1|2|U|1044
6XYW|1|2|G|1045
6XYW|1|2|C|1046
6XYW|1|2|A|1047
6XYW|1|2|U|1048
*
6XYW|1|2|A|1554
6XYW|1|2|U|1555
6XYW|1|2|G|1556
6XYW|1|2|G|1557
Current chains
- Chain 2
- RNA (1743-MER)
Nearby chains
- Chain Bb
- Ribosomal protein S3, mitochondrial
- Chain Bi
- 40S ribosomal protein S10, mitochondrial
- Chain Bm
- At2g34520
- Chain Bx
- 37S ribosomal protein S27
Coloring options: