IL_6XYW_197
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- UUUUGG*CCAAA
- Length
- 11 nucleotides
- Bulged bases
- 6XYW|1|1|U|1097
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XYW_197 not in the Motif Atlas
- Geometric match to IL_7VYX_004
- Geometric discrepancy: 0.321
- The information below is about IL_7VYX_004
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 17
Unit IDs
6XYW|1|1|U|1096
6XYW|1|1|U|1097
6XYW|1|1|U|1098
6XYW|1|1|U|1099
6XYW|1|1|G|1100
6XYW|1|1|G|1101
*
6XYW|1|1|C|1113
6XYW|1|1|C|1114
6XYW|1|1|A|1115
6XYW|1|1|A|1116
6XYW|1|1|A|1117
Current chains
- Chain 1
- RNA (2842-MER)
Nearby chains
- Chain 3
- RNA (118-MER)
- Chain AL
- Uncharacterized protein At1g27435/F17L21.30
- Chain Am
- 60S ribosomal protein L16, mitochondrial
- Chain Az
- At5g55140
Coloring options: