IL_6XYW_207
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- GGAACUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XYW_207 not in the Motif Atlas
- Homologous match to IL_7A0S_109
- Geometric discrepancy: 0.1083
- The information below is about IL_7A0S_109
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.1
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 10
Unit IDs
6XYW|1|1|G|2001
6XYW|1|1|G|2002
6XYW|1|1|A|2003
6XYW|1|1|A|2004
6XYW|1|1|C|2005
6XYW|1|1|U|2006
6XYW|1|1|C|2007
6XYW|1|1|G|2008
6XYW|1|1|G|2009
*
6XYW|1|1|C|2301
6XYW|1|1|U|2302
6XYW|1|1|G|2303
6XYW|1|1|U|2304
6XYW|1|1|C|2305
Current chains
- Chain 1
- RNA (2842-MER)
Nearby chains
- Chain Ac
- 50S ribosomal protein L3-2, mitochondrial
- Chain Ak
- 50S ribosomal protein HLP, mitochondrial
Coloring options: