IL_6XYW_217
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- AUCGG*CAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XYW_217 not in the Motif Atlas
- Geometric match to IL_8C3A_111
- Geometric discrepancy: 0.2715
- The information below is about IL_8C3A_111
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50458.1
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
6XYW|1|2|A|589
6XYW|1|2|U|590
6XYW|1|2|C|591
6XYW|1|2|G|592
6XYW|1|2|G|593
*
6XYW|1|2|C|639
6XYW|1|2|A|640
6XYW|1|2|A|641
6XYW|1|2|U|642
Current chains
- Chain 2
- RNA (1743-MER)
Nearby chains
- Chain Bg
- 40S ribosomal protein S15a-5
- Chain Bn
- At1g15810/F7H2_23
- Chain Bp
- Nucleic acid-binding, OB-fold-like protein
- Chain Bv
- AT5g49210/K21P3_8
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