IL_6XZA_020
3D structure
- PDB id
- 6XZA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.66 Å
Loop
- Sequence
- UGAAGAAG*UGUAAAG
- Length
- 15 nucleotides
- Bulged bases
- 6XZA|1|A1|A|412
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XZA_020 not in the Motif Atlas
- Homologous match to IL_4LFB_017
- Geometric discrepancy: 0.124
- The information below is about IL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28026.3
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
6XZA|1|A1|U|409
6XZA|1|A1|G|410
6XZA|1|A1|A|411
6XZA|1|A1|A|412
6XZA|1|A1|G|413
6XZA|1|A1|A|414
6XZA|1|A1|A|415
6XZA|1|A1|G|416
*
6XZA|1|A1|U|427
6XZA|1|A1|G|428
6XZA|1|A1|U|429
6XZA|1|A1|A|430
6XZA|1|A1|A|431
6XZA|1|A1|A|432
6XZA|1|A1|G|433
Current chains
- Chain A1
- 16S rRNA
Nearby chains
- Chain D1
- 30S ribosomal protein S4
Coloring options: