IL_6XZB_041
3D structure
- PDB id
- 6XZB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.54 Å
Loop
- Sequence
- GCA*UUCCC
- Length
- 8 nucleotides
- Bulged bases
- 6XZB|1|A1|C|934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XZB_041 not in the Motif Atlas
- Homologous match to IL_5J7L_041
- Geometric discrepancy: 0.1448
- The information below is about IL_5J7L_041
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_47078.3
- Basepair signature
- cWW-cWS-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
6XZB|1|A1|G|933
6XZB|1|A1|C|934
6XZB|1|A1|A|935
*
6XZB|1|A1|U|1380
6XZB|1|A1|U|1381
6XZB|1|A1|C|1382
6XZB|1|A1|C|1383
6XZB|1|A1|C|1384
Current chains
- Chain A1
- 16S rRNA
Nearby chains
- Chain G1
- 30S ribosomal protein S7
- Chain I1
- 30S ribosomal protein S9
- Chain f2
- Transfer RNA; tRNA
Coloring options: