#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5break 6 71-31-74-75-6
1 IL_4LFB_0374LFB0.05421Minor groove platformA SSU rRNAU1380U1381C1382C1383C1384*G933A935cWWcWScWW
2 IL_5J7L_0415J7L0.00001Minor groove platformAA SSU rRNAU1380U1381C1382C1383C1384*G933A935ncSHcWWcWScWW
3 IL_5J7L_0435J7L0.57430Minor groove platformAA SSU rRNAG993A994C995A996U997*A1044C1045cWWcWScWW
4 IL_4LFB_0394LFB0.59430Minor groove platformA SSU rRNAG993A994C995A996U997*A1044C1045cWWcWScWW

3D structures

Complete motif including flanking bases
SequenceCounts
UUCCC*GCA2
GACAU*AC2
Non-Watson-Crick part of the motif
SequenceCounts
UCC*C2
ACA*2

Release history

Release3.963.973.98
Date2025-04-232025-05-212025-06-18
StatusUpdated, 1 parentExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Minor groove platform (4)
  • Basepair signature
    cWW-cWS-L-cWW-L
    Heat map statistics
    Min 0.05 | Avg 0.32 | Max 0.61
    Help

    Coloring options:

    IL_4LFB_037:IL_4LFB_037 = 0IL_4LFB_037:IL_5J7L_041 = 0.0542IL_4LFB_037:IL_5J7L_043 = 0.5897IL_4LFB_037:IL_4LFB_039 = 0.6126IL_5J7L_041:IL_4LFB_037 = 0.0542IL_5J7L_041:IL_5J7L_041 = 0IL_5J7L_041:IL_5J7L_043 = 0.5743IL_5J7L_041:IL_4LFB_039 = 0.5943IL_5J7L_043:IL_4LFB_037 = 0.5897IL_5J7L_043:IL_5J7L_041 = 0.5743IL_5J7L_043:IL_5J7L_043 = 0IL_5J7L_043:IL_4LFB_039 = 0.1413IL_4LFB_039:IL_4LFB_037 = 0.6126IL_4LFB_039:IL_5J7L_041 = 0.5943IL_4LFB_039:IL_5J7L_043 = 0.1413IL_4LFB_039:IL_4LFB_039 = 0IL_4LFB_037IL_5J7L_041IL_5J7L_043IL_4LFB_039Discrepancy0.000.100.200.300.400.500.60
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