IL_6Y0G_267
3D structure
- PDB id
- 6Y0G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome in classical-PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGG*CACG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Y0G_267 not in the Motif Atlas
- Geometric match to IL_8C3A_468
- Geometric discrepancy: 0.3313
- The information below is about IL_8C3A_468
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_10289.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 237
Unit IDs
6Y0G|1|S2|C|1234
6Y0G|1|S2|G|1235
6Y0G|1|S2|G|1236
*
6Y0G|1|S2|C|1521
6Y0G|1|S2|A|1522
6Y0G|1|S2|C|1523
6Y0G|1|S2|G|1524
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain B4
- Transfer RNA; tRNA
- Chain SP
- 40S ribosomal protein S15
- Chain SS
- 40S ribosomal protein S18
- Chain SZ
- 40S ribosomal protein S25
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