IL_6Y2L_036

3D structure

PDB id

6Y2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUC*GCCCG

Length

8 nucleotides

Bulged bases

6Y2L|1|L5|C|1214, 6Y2L|1|L5|C|1215

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6Y2L_036 not in the Motif Atlas

Geometric match to IL_4KQ0_001

Geometric discrepancy: 0.3377

The information below is about IL_4KQ0_001

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10892.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

58

Unit IDs

6Y2L|1|L5|C|1082
6Y2L|1|L5|U|1083
6Y2L|1|L5|C|1084
*
6Y2L|1|L5|G|1213
6Y2L|1|L5|C|1214
6Y2L|1|L5|C|1215
6Y2L|1|L5|C|1216
6Y2L|1|L5|G|1217

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LF

60S ribosomal protein L7