IL_6Y2L_256

3D structure

PDB id

6Y2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AUUA*UUCU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6Y2L_256 not in the Motif Atlas

Homologous match to IL_8C3A_481

Geometric discrepancy: 0.1074

The information below is about IL_8C3A_481

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_36174.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

15

Unit IDs

6Y2L|1|L5|A|1746
6Y2L|1|L5|U|1747
6Y2L|1|L5|U|1748
6Y2L|1|L5|A|1749
*
6Y2L|1|L5|U|1781
6Y2L|1|L5|U|1782
6Y2L|1|L5|C|1783
6Y2L|1|L5|U|1784

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain L7

5S ribosomal RNA; 5S rRNA

Chain LD

60S ribosomal protein L5

Chain LI

60S ribosomal protein L10-like