IL_8C3A_481

3D structure

PDB id

8C3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ailanthone bound to the Candida albicans 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AUUA*UUCU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_36174.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

15

Unit IDs

8C3A|1|1|A|1002
8C3A|1|1|U|1003
8C3A|1|1|U|1004
8C3A|1|1|A|1005
*
8C3A|1|1|U|1037
8C3A|1|1|U|1038
8C3A|1|1|C|1039
8C3A|1|1|U|1040

Current chains

Chain 1

25S

Nearby chains

Chain m

Uncharacterized protein CaJ7.0206

Chain r

60S ribosomal protein L10