IL_6Y57_162
3D structure
- PDB id
- 6Y57 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome in hybrid-PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UAAU*AUCGA
- Length
- 9 nucleotides
- Bulged bases
- 6Y57|1|L8|G|94
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Y57_162 not in the Motif Atlas
- Geometric match to IL_3NPQ_006
- Geometric discrepancy: 0.394
- The information below is about IL_3NPQ_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65740.1
- Basepair signature
- cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
6Y57|1|L8|U|64
6Y57|1|L8|A|65
6Y57|1|L8|A|66
6Y57|1|L8|U|67
*
6Y57|1|L8|A|91
6Y57|1|L8|U|92
6Y57|1|L8|C|93
6Y57|1|L8|G|94
6Y57|1|L8|A|95
Current chains
- Chain L8
- 5.8S ribosomal RNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain LY
- 60S ribosomal protein L26
- Chain Lh
- 60S ribosomal protein L35
- Chain Lj
- 60S ribosomal protein L37
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