IL_6Y57_212
3D structure
- PDB id
- 6Y57 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome in hybrid-PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UGAC*GUACA
- Length
- 9 nucleotides
- Bulged bases
- 6Y57|1|S2|A|1695
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Y57_212 not in the Motif Atlas
- Geometric match to IL_5J7L_327
- Geometric discrepancy: 0.3226
- The information below is about IL_5J7L_327
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_43644.1
- Basepair signature
- cWW-cWW-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
6Y57|1|S2|U|1202
6Y57|1|S2|G|1203
6Y57|1|S2|A|1204
6Y57|1|S2|C|1205
*
6Y57|1|S2|G|1693
6Y57|1|S2|U|1694
6Y57|1|S2|A|1695
6Y57|1|S2|C|1696
6Y57|1|S2|A|1697
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SC
- 40S ribosomal protein S2
- Chain Sa
- 40S ribosomal protein S26
Coloring options: