IL_6Y69_184
3D structure
- PDB id
- 6Y69 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- GUGUAGGAUAG*CC
- Length
- 13 nucleotides
- Bulged bases
- 6Y69|1|A|U|2111, 6Y69|1|A|U|2118, 6Y69|1|A|A|2119
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Y69_184 not in the Motif Atlas
- Homologous match to IL_3U4M_002
- Geometric discrepancy: 0.4694
- The information below is about IL_3U4M_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32056.1
- Basepair signature
- cWW-L-cWW-L-L-tWH-R-L-R-L
- Number of instances in this motif group
- 3
Unit IDs
6Y69|1|A|G|2110
6Y69|1|A|U|2111
6Y69|1|A|G|2112
6Y69|1|A|U|2113
6Y69|1|A|A|2114
6Y69|1|A|G|2115
6Y69|1|A|G|2116
6Y69|1|A|A|2117
6Y69|1|A|U|2118
6Y69|1|A|A|2119
6Y69|1|A|G|2120
*
6Y69|1|A|C|2178
6Y69|1|A|C|2179
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain w
- Transfer RNA; tRNA
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