IL_6Y7C_041

3D structure

PDB id

6Y7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Early cytoplasmic yeast pre-40S particle (purified with Tsr1 as bait)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GACGUUU*AUCGUAAU

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y7C|1|2|G|816
6Y7C|1|2|A|817
6Y7C|1|2|C|818
6Y7C|1|2|G|819
6Y7C|1|2|U|820
6Y7C|1|2|U|821
6Y7C|1|2|U|822
*
6Y7C|1|2|A|850
6Y7C|1|2|U|851
6Y7C|1|2|C|852
6Y7C|1|2|G|853
6Y7C|1|2|U|854
6Y7C|1|2|A|855
6Y7C|1|2|A|856
6Y7C|1|2|U|857

Current chains

Chain 2

20S ribosomal RNA

Nearby chains

Chain H

40S ribosomal protein S7-A