IL_6YAL_020
3D structure
- PDB id
- 6YAL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 48S late-stage initiation complex with beta-globin mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGG*CGAUUC
- Length
- 9 nucleotides
- Bulged bases
- 6YAL|1|2|U|418
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6YAL_020 not in the Motif Atlas
- Homologous match to IL_4V88_404
- Geometric discrepancy: 0.1129
- The information below is about IL_4V88_404
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_11347.3
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6YAL|1|2|G|401
6YAL|1|2|G|402
6YAL|1|2|G|403
*
6YAL|1|2|C|414
6YAL|1|2|G|415
6YAL|1|2|A|416
6YAL|1|2|U|417
6YAL|1|2|U|418
6YAL|1|2|C|419
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain G
- 40S ribosomal protein eS4
- Chain L
- 40S ribosomal protein uS4
- Chain Z
- 40S ribosomal protein uS12
Coloring options: