IL_6YAL_078
3D structure
- PDB id
- 6YAL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 48S late-stage initiation complex with beta-globin mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CCC*GG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6YAL_078 not in the Motif Atlas
- Geometric match to IL_1R3E_002
- Geometric discrepancy: 0.2119
- The information below is about IL_1R3E_002
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_84476.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
6YAL|1|2|C|1413
6YAL|1|2|C|1414
6YAL|1|2|C|1415
*
6YAL|1|2|G|1424
6YAL|1|2|G|1425
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain S
- 40S ribosomal protein uS9
- Chain V
- 40S ribosomal protein eS19
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