IL_6YDP_035

3D structure

PDB id

6YDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtEFG1 and P site fMet-tRNAMet (POST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGAAAG*CCAAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YDP|1|AA|C|749
6YDP|1|AA|G|750
6YDP|1|AA|A|751
6YDP|1|AA|A|752
6YDP|1|AA|A|753
6YDP|1|AA|G|754
*
6YDP|1|AA|C|773
6YDP|1|AA|C|774
6YDP|1|AA|A|775
6YDP|1|AA|A|776
6YDP|1|AA|A|777
6YDP|1|AA|G|778

Current chains

Chain AA

12S rRNA

Nearby chains

Chain Ag

Death associated protein 3

Chain Bd

Uncharacterized protein

Chain Bk

39S ribosomal protein L48, mitochondrial