IL_6YDP_045

3D structure

PDB id

6YDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtEFG1 and P site fMet-tRNAMet (POST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCA*UAAAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YDP|1|BA|C|2
6YDP|1|BA|C|3
6YDP|1|BA|A|4
*
6YDP|1|BA|U|147
6YDP|1|BA|A|148
6YDP|1|BA|A|149
6YDP|1|BA|A|150
6YDP|1|BA|A|151
6YDP|1|BA|G|152

Current chains

Chain BA

12S rRNA

Nearby chains

Chain B5

bL32m

Chain BU

Mitochondrial ribosomal protein L20

Chain BW

uL22m

Chain Bh

mL44

Chain Bn

Mitochondrial ribosomal protein L51