IL_6YDP_066

3D structure

PDB id

6YDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtEFG1 and P site fMet-tRNAMet (POST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUCG*CACCAAG

Length

11 nucleotides

Bulged bases

6YDP|1|BA|C|665, 6YDP|1|BA|A|777

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YDP|1|BA|C|663
6YDP|1|BA|U|664
6YDP|1|BA|C|665
6YDP|1|BA|G|666
*
6YDP|1|BA|C|773
6YDP|1|BA|A|774
6YDP|1|BA|C|775
6YDP|1|BA|C|776
6YDP|1|BA|A|777
6YDP|1|BA|A|778
6YDP|1|BA|G|779

Current chains

Chain BA

12S rRNA

Nearby chains

Chain BR

Uncharacterized protein

Chain Bw

39S ribosomal protein S30, mitochondrial