IL_6YDP_068

3D structure

PDB id

6YDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtEFG1 and P site fMet-tRNAMet (POST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

ACCA*UAAUUACAU

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YDP|1|BA|A|710
6YDP|1|BA|C|711
6YDP|1|BA|C|712
6YDP|1|BA|A|713
*
6YDP|1|BA|U|743
6YDP|1|BA|A|744
6YDP|1|BA|A|745
6YDP|1|BA|U|746
6YDP|1|BA|U|747
6YDP|1|BA|A|748
6YDP|1|BA|C|749
6YDP|1|BA|A|750
6YDP|1|BA|U|751

Current chains

Chain BA

12S rRNA

Nearby chains

Chain BX

uL23m

Chain Ba

Mitochondrial ribosomal protein L37

Chain Be

Mitochondrial ribosomal protein L41

Chain Bw

39S ribosomal protein S30, mitochondrial