IL_6YDP_069

3D structure

PDB id

6YDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtEFG1 and P site fMet-tRNAMet (POST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCAAAACAACACU*AACG

Length

17 nucleotides

Bulged bases

6YDP|1|BA|C|725, 6YDP|1|BA|A|727

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YDP|1|BA|C|719
6YDP|1|BA|C|720
6YDP|1|BA|A|721
6YDP|1|BA|A|722
6YDP|1|BA|A|723
6YDP|1|BA|A|724
6YDP|1|BA|C|725
6YDP|1|BA|A|726
6YDP|1|BA|A|727
6YDP|1|BA|C|728
6YDP|1|BA|A|729
6YDP|1|BA|C|730
6YDP|1|BA|U|731
*
6YDP|1|BA|A|734
6YDP|1|BA|A|735
6YDP|1|BA|C|736
6YDP|1|BA|G|737

Current chains

Chain BA

12S rRNA

Nearby chains

Chain BD

uL2m

Chain Ba

Mitochondrial ribosomal protein L37