IL_6YDP_112

3D structure

PDB id

6YDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtEFG1 and P site fMet-tRNAMet (POST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAUAAUU*AAUUAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YDP|1|BA|G|1507
6YDP|1|BA|A|1508
6YDP|1|BA|U|1509
6YDP|1|BA|A|1510
6YDP|1|BA|A|1511
6YDP|1|BA|U|1512
6YDP|1|BA|U|1513
*
6YDP|1|BA|A|1533
6YDP|1|BA|A|1534
6YDP|1|BA|U|1535
6YDP|1|BA|U|1536
6YDP|1|BA|A|1537
6YDP|1|BA|A|1538
6YDP|1|BA|C|1539

Current chains

Chain BA

12S rRNA

Nearby chains

Chain B9

Ribosomal protein

Chain BN

uL13m

Chain Bx

Mitochondrial ribosomal protein S18A