IL_6YLY_046

3D structure

PDB id

6YLY (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-60S State NE2 (TAP-Flag-Nop53)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUGGC*GAAUCC

Length

11 nucleotides

Bulged bases

6YLY|1|1|G|1236

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YLY|1|1|G|1234
6YLY|1|1|U|1235
6YLY|1|1|G|1236
6YLY|1|1|G|1237
6YLY|1|1|C|1238
*
6YLY|1|1|G|1250
6YLY|1|1|A|1251
6YLY|1|1|A|1252
6YLY|1|1|U|1253
6YLY|1|1|C|1254
6YLY|1|1|C|1255

Current chains

Chain 1

25S rRNA

Nearby chains

Chain W

Ribosome assembly factor MRT4