IL_6YLY_067

3D structure

PDB id

6YLY (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-60S State NE2 (TAP-Flag-Nop53)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCGUAAC*GGAUAAGG

Length

15 nucleotides

Bulged bases

6YLY|1|1|U|1931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YLY|1|1|C|1917
6YLY|1|1|C|1918
6YLY|1|1|G|1919
6YLY|1|1|U|1920
6YLY|1|1|A|1921
6YLY|1|1|A|1922
6YLY|1|1|C|1923
*
6YLY|1|1|G|1928
6YLY|1|1|G|1929
6YLY|1|1|A|1930
6YLY|1|1|U|1931
6YLY|1|1|A|1932
6YLY|1|1|A|1933
6YLY|1|1|G|1934
6YLY|1|1|G|1935

Current chains

Chain 1

25S rRNA

Nearby chains

Chain I

Bud site selection protein 20

Chain R

60S ribosomal protein L19-A

Chain p

60S ribosomal protein L43-A