IL_6YS5_015
3D structure
- PDB id
- 6YS5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Acinetobacter baumannii ribosome-amikacin complex - 30S subunit head
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UACAAAG*CAAAAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6YS5_015 not in the Motif Atlas
- Homologous match to IL_4LFB_051
- Geometric discrepancy: 0.1102
- The information below is about IL_4LFB_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12056.1
- Basepair signature
- cWW-L-R-R-bif-cWW
- Number of instances in this motif group
- 2
Unit IDs
6YS5|1|3|U|1244
6YS5|1|3|A|1245
6YS5|1|3|C|1246
6YS5|1|3|A|1247
6YS5|1|3|A|1248
6YS5|1|3|A|1249
6YS5|1|3|G|1250
*
6YS5|1|3|C|1281
6YS5|1|3|A|1282
6YS5|1|3|A|1283
6YS5|1|3|A|1284
6YS5|1|3|A|1285
6YS5|1|3|A|1286
6YS5|1|3|G|1287
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain h
- 30S ribosomal protein S7
- Chain j
- 30S ribosomal protein S9
- Chain k
- 30S ribosomal protein S10
- Chain o
- 30S ribosomal protein S14
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