IL_6YSU_079
3D structure
- PDB id
- 6YSU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AA*UACU
- Length
- 6 nucleotides
- Bulged bases
- 6YSU|1|A|A|2439
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6YSU_079 not in the Motif Atlas
- Homologous match to IL_7A0S_076
- Geometric discrepancy: 0.1535
- The information below is about IL_7A0S_076
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_51454.3
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 45
Unit IDs
6YSU|1|A|A|2070
6YSU|1|A|A|2071
*
6YSU|1|A|U|2438
6YSU|1|A|A|2439
6YSU|1|A|C|2440
6YSU|1|A|U|2441
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain v
- Api137
- Chain w
- Transfer RNA; tRNA
- Chain y
- Alternative stalled-ribosome rescue factor B
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