IL_7A0S_076

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

GA*UACC

Length

6 nucleotides

Bulged bases (A, C, G, U)

2418A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_42622.5

Basepair signature

cWW-cSH-tHS-cWW

Number of instances in this motif group

33

Unit IDs

7A0S|1|X|G|2053
7A0S|1|X|A|2054
*
7A0S|1|X|U|2417
7A0S|1|X|A|2418
7A0S|1|X|C|2419
7A0S|1|X|C|2420

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain A

50S ribosomal protein L2