IL_6YSU_153
3D structure
- PDB id
- 6YSU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GCA*UUCCC
- Length
- 8 nucleotides
- Bulged bases
- 6YSU|1|a|C|934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6YSU_153 not in the Motif Atlas
- Homologous match to IL_5J7L_041
- Geometric discrepancy: 0.2126
- The information below is about IL_5J7L_041
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_47078.3
- Basepair signature
- cWW-cWS-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
6YSU|1|a|G|933
6YSU|1|a|C|934
6YSU|1|a|A|935
*
6YSU|1|a|U|1380
6YSU|1|a|U|1381
6YSU|1|a|C|1382
6YSU|1|a|C|1383
6YSU|1|a|C|1384
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain g
- 30S ribosomal protein S7
- Chain i
- 30S ribosomal protein S9
- Chain w
- Transfer RNA; tRNA
- Chain x
- RNA (5'-R(P*AP*UP*GP*UP*UP*C)-3')
Coloring options: