IL_6YTF_003
3D structure
- PDB id
- 6YTF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit head
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GACAU*AC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6YTF_003 not in the Motif Atlas
- Geometric match to IL_4LFB_039
- Geometric discrepancy: 0.2219
- The information below is about IL_4LFB_039
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_47078.3
- Basepair signature
- cWW-cWS-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
6YTF|1|3|G|990
6YTF|1|3|A|991
6YTF|1|3|C|992
6YTF|1|3|A|993
6YTF|1|3|U|994
*
6YTF|1|3|A|1041
6YTF|1|3|C|1042
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain o
- 30S ribosomal protein S14
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