IL_6Z1P_020
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AAAC*GAU
- Length
- 7 nucleotides
- Bulged bases
- 6Z1P|1|Ab|A|863
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Z1P_020 not in the Motif Atlas
- Geometric match to IL_5J7L_009
- Geometric discrepancy: 0.2669
- The information below is about IL_5J7L_009
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_57744.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 22
Unit IDs
6Z1P|1|Ab|A|861
6Z1P|1|Ab|A|862
6Z1P|1|Ab|A|863
6Z1P|1|Ab|C|864
*
6Z1P|1|Ab|G|1050
6Z1P|1|Ab|A|1051
6Z1P|1|Ab|U|1052
Current chains
- Chain Ab
- LSU rRNA_2
Nearby chains
- Chain AA
- 50S ribosomal protein L27
- Chain AJ
- Ribosomal protein L51/S25/CI-B8 domain protein
- Chain Ao
- 50S ribosomal protein L13
- Chain Au
- 50S ribosomal protein L20
- Chain Av
- 50S ribosomal protein L21
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