IL_6Z1P_027
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CGUUU*AUAUUG
- Length
- 11 nucleotides
- Bulged bases
- 6Z1P|1|Ab|U|1123
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Z1P_027 not in the Motif Atlas
- Geometric match to IL_4V88_422
- Geometric discrepancy: 0.371
- The information below is about IL_4V88_422
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
6Z1P|1|Ab|C|1075
6Z1P|1|Ab|G|1076
6Z1P|1|Ab|U|1077
6Z1P|1|Ab|U|1078
6Z1P|1|Ab|U|1079
*
6Z1P|1|Ab|A|1120
6Z1P|1|Ab|U|1121
6Z1P|1|Ab|A|1122
6Z1P|1|Ab|U|1123
6Z1P|1|Ab|U|1124
6Z1P|1|Ab|G|1125
Current chains
- Chain Ab
- LSU rRNA_2
Nearby chains
- Chain AJ
- Ribosomal protein L51/S25/CI-B8 domain protein
- Chain Aa
- LSU rRNA_1
- Chain Ae
- 50S ribosomal protein L4
- Chain Aq
- Ribosomal protein L15, putative
- Chain Au
- 50S ribosomal protein L20
Coloring options: