IL_6Z1P_041
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- ACUAGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 6Z1P|1|Ab|G|1711
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Z1P_041 not in the Motif Atlas
- Geometric match to IL_4WF9_065
- Geometric discrepancy: 0.1371
- The information below is about IL_4WF9_065
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_28217.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
6Z1P|1|Ab|A|1431
6Z1P|1|Ab|C|1432
6Z1P|1|Ab|U|1433
6Z1P|1|Ab|A|1434
6Z1P|1|Ab|G|1435
6Z1P|1|Ab|G|1436
*
6Z1P|1|Ab|C|1709
6Z1P|1|Ab|U|1710
6Z1P|1|Ab|G|1711
6Z1P|1|Ab|U|1712
Current chains
- Chain Ab
- LSU rRNA_2
Nearby chains
- Chain Ad
- 50S ribosomal protein L3
- Chain Ap
- Ribosomal protein L14
Coloring options: