IL_6Z1P_066

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CA*UACG

Length

6 nucleotides

Bulged bases

6Z1P|1|Ab|A|2266, 6Z1P|1|Ab|C|2267

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6Z1P_066 not in the Motif Atlas

Homologous match to IL_4WF9_096

Geometric discrepancy: 0.125

The information below is about IL_4WF9_096

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_44609.2

Basepair signature

cWW-cWW

Number of instances in this motif group

24

Unit IDs

6Z1P|1|Ab|C|2206
6Z1P|1|Ab|A|2207
*
6Z1P|1|Ab|U|2265
6Z1P|1|Ab|A|2266
6Z1P|1|Ab|C|2267
6Z1P|1|Ab|G|2268

Current chains

Chain Ab

LSU rRNA_2

Nearby chains

Chain Ad

50S ribosomal protein L3

Chain Ao

50S ribosomal protein L13