IL_6Z1P_099
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UGGCUAAU*AG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Z1P_099 not in the Motif Atlas
- Geometric match to IL_5WLH_001
- Geometric discrepancy: 0.1437
- The information below is about IL_5WLH_001
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_71421.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
6Z1P|1|Bb|U|498
6Z1P|1|Bb|G|499
6Z1P|1|Bb|G|500
6Z1P|1|Bb|C|501
6Z1P|1|Bb|U|502
6Z1P|1|Bb|A|503
6Z1P|1|Bb|A|504
6Z1P|1|Bb|U|505
*
6Z1P|1|Bb|A|535
6Z1P|1|Bb|G|536
Current chains
- Chain Bb
- SSU rRNA_2
Nearby chains
- Chain Ba
- SSU rRNA_1
- Chain Be
- Ymf76
- Chain Bf
- 30S ribosomal protein S5
- Chain Bl
- Ribosomal protein S12
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