IL_6Z1P_102
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CAUAG*UGAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Z1P_102 not in the Motif Atlas
- Homologous match to IL_6CZR_135
- Geometric discrepancy: 0.1816
- The information below is about IL_6CZR_135
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.6
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
6Z1P|1|Bb|C|575
6Z1P|1|Bb|A|576
6Z1P|1|Bb|U|577
6Z1P|1|Bb|A|578
6Z1P|1|Bb|G|579
*
6Z1P|1|Bb|U|746
6Z1P|1|Bb|G|747
6Z1P|1|Bb|A|748
6Z1P|1|Bb|U|749
6Z1P|1|Bb|G|750
Current chains
- Chain Bb
- SSU rRNA_2
Nearby chains
- Chain Bo
- 30S ribosomal protein S15
- Chain Bq
- 30S ribosomal protein S17
Coloring options: