IL_6Z1P_103
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UUAC*GUAAA
- Length
- 9 nucleotides
- Bulged bases
- 6Z1P|1|Bb|A|639
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Z1P_103 not in the Motif Atlas
- Geometric match to IL_4K27_001
- Geometric discrepancy: 0.1605
- The information below is about IL_4K27_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 39
Unit IDs
6Z1P|1|Bb|U|584
6Z1P|1|Bb|U|585
6Z1P|1|Bb|A|586
6Z1P|1|Bb|C|587
*
6Z1P|1|Bb|G|636
6Z1P|1|Bb|U|637
6Z1P|1|Bb|A|638
6Z1P|1|Bb|A|639
6Z1P|1|Bb|A|640
Current chains
- Chain Bb
- SSU rRNA_2
Nearby chains
- Chain BI
- Enoyl-CoA hydratase/isomerase
- Chain BL
- SelR domain protein
- Chain BN
- mS82
- Chain Bo
- 30S ribosomal protein S15
- Chain Bq
- 30S ribosomal protein S17
- Chain Bv
- mS26
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