IL_6Z1P_132
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CAGAUU*AUGAAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Z1P_132 not in the Motif Atlas
- Homologous match to IL_4LFB_055
- Geometric discrepancy: 0.1469
- The information below is about IL_4LFB_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_57885.2
- Basepair signature
- cWW-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
6Z1P|1|Bb|C|1314
6Z1P|1|Bb|A|1315
6Z1P|1|Bb|G|1316
6Z1P|1|Bb|A|1317
6Z1P|1|Bb|U|1318
6Z1P|1|Bb|U|1319
*
6Z1P|1|Bb|A|1340
6Z1P|1|Bb|U|1341
6Z1P|1|Bb|G|1342
6Z1P|1|Bb|A|1343
6Z1P|1|Bb|A|1344
6Z1P|1|Bb|G|1345
Current chains
- Chain Bb
- SSU rRNA_2
Nearby chains
- Chain BF
- mS75
- Chain Bm
- Ribosomal protein S13
- Chain Bs
- Ribosomal protein S19
- Chain By
- mS33
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