IL_6Z1P_142

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUC*GUUG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6Z1P_142 not in the Motif Atlas

Geometric match to IL_6ZDU_001

Geometric discrepancy: 0.3205

The information below is about IL_6ZDU_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_99358.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

8

Unit IDs

6Z1P|1|Bb|C|1457
6Z1P|1|Bb|U|1458
6Z1P|1|Bb|C|1459
*
6Z1P|1|Bb|G|1519
6Z1P|1|Bb|U|1520
6Z1P|1|Bb|U|1521
6Z1P|1|Bb|G|1522

Current chains

Chain Bb

SSU rRNA_2

Nearby chains

Chain Ab

Large subunit ribosomal RNA; LSU rRNA

Chain BV

mS90

Chain BY

mS93