IL_6Z1P_148
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AAUAAG*CGAAUU
- Length
- 12 nucleotides
- Bulged bases
- 6Z1P|1|Ab|A|1047
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Z1P_148 not in the Motif Atlas
- Geometric match to IL_7A0S_098
- Geometric discrepancy: 0.2081
- The information below is about IL_7A0S_098
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_91079.1
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
6Z1P|1|Ab|A|865
6Z1P|1|Ab|A|866
6Z1P|1|Ab|U|867
6Z1P|1|Ab|A|868
6Z1P|1|Ab|A|869
6Z1P|1|Ab|G|870
*
6Z1P|1|Ab|C|1044
6Z1P|1|Ab|G|1045
6Z1P|1|Ab|A|1046
6Z1P|1|Ab|A|1047
6Z1P|1|Ab|U|1048
6Z1P|1|Ab|U|1049
Current chains
- Chain Ab
- LSU rRNA_2
Nearby chains
- Chain AA
- 50S ribosomal protein L27
- Chain AQ
- mL102
- Chain Au
- 50S ribosomal protein L20
- Chain Av
- 50S ribosomal protein L21
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