IL_6Z1P_170
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GAUUU*AGAGC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Z1P_170 not in the Motif Atlas
- Homologous match to IL_4LFB_065
- Geometric discrepancy: 0.2602
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 17
Unit IDs
6Z1P|1|Bb|G|665
6Z1P|1|Bb|A|666
6Z1P|1|Bb|U|667
6Z1P|1|Bb|U|668
6Z1P|1|Bb|U|669
*
6Z1P|1|Bb|A|701
6Z1P|1|Bb|G|702
6Z1P|1|Bb|A|703
6Z1P|1|Bb|G|704
6Z1P|1|Bb|C|705
Current chains
- Chain Bb
- SSU rRNA_2
Nearby chains
- Chain AB
- Ribosomal protein L28
- Chain Ac
- Ribosomal protein L2
- Chain Bg
- Ribosomal protein S6
- Chain Bk
- Ymf61
- Chain Br
- Ribosomal protein S18
- Chain Bt
- bS21m
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