IL_6ZCE_025
3D structure
- PDB id
- 6ZCE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast ABCE1-bound 43S pre-initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- UUA*UA
- Length
- 5 nucleotides
- Bulged bases
- 6ZCE|1|A|U|440
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZCE_025 not in the Motif Atlas
- Homologous match to IL_4V88_407
- Geometric discrepancy: 0.1592
- The information below is about IL_4V88_407
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
6ZCE|1|A|U|439
6ZCE|1|A|U|440
6ZCE|1|A|A|441
*
6ZCE|1|A|U|463
6ZCE|1|A|A|464
Current chains
- Chain A
- 18S ribosomal RNA (1719-MER)
Nearby chains
- Chain F
- 40S ribosomal protein S4-A
- Chain Z
- 40S ribosomal protein S24-A
- Chain k
- Translation initiation factor RLI1
Coloring options: