IL_6ZCE_036
3D structure
- PDB id
- 6ZCE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast ABCE1-bound 43S pre-initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- CGUAGU*AUCAAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZCE_036 not in the Motif Atlas
- Geometric match to IL_8ZA4_001
- Geometric discrepancy: 0.2822
- The information below is about IL_8ZA4_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_76308.6
- Basepair signature
- cWW-tSH-tHW-tHS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
6ZCE|1|A|C|627
6ZCE|1|A|G|628
6ZCE|1|A|U|629
6ZCE|1|A|A|630
6ZCE|1|A|G|631
6ZCE|1|A|U|632
*
6ZCE|1|A|A|967
6ZCE|1|A|U|968
6ZCE|1|A|C|969
6ZCE|1|A|A|970
6ZCE|1|A|A|971
6ZCE|1|A|G|972
Current chains
- Chain A
- 18S ribosomal RNA (1719-MER)
Nearby chains
- Chain M
- 40S ribosomal protein S11-A
- Chain O
- 40S ribosomal protein S13
- Chain X
- 40S ribosomal protein S22-A
- Chain Y
- 40S ribosomal protein S23-A
- Chain q
- Eukaryotic translation initiation factor 3 subunit C
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