IL_6ZCE_066
3D structure
- PDB id
- 6ZCE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast ABCE1-bound 43S pre-initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 6ZCE|1|A|C|1274
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZCE_066 not in the Motif Atlas
- Geometric match to IL_4V88_450
- Geometric discrepancy: 0.1747
- The information below is about IL_4V88_450
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_76319.2
- Basepair signature
- cWW-L-cWS-cWW
- Number of instances in this motif group
- 4
Unit IDs
6ZCE|1|A|U|1272
6ZCE|1|A|G|1273
6ZCE|1|A|C|1274
6ZCE|1|A|A|1275
6ZCE|1|A|U|1276
*
6ZCE|1|A|A|1436
6ZCE|1|A|U|1437
6ZCE|1|A|G|1438
Current chains
- Chain A
- 18S ribosomal RNA (1719-MER)
Nearby chains
- Chain E
- 40S ribosomal protein S3
- Chain L
- 40S ribosomal protein S10-A
- Chain V
- 40S ribosomal protein S20
- Chain e
- 40S ribosomal protein S29-A
- Chain i
- Eukaryotic translation initiation factor 1A
- Chain s
- Eukaryotic translation initiation factor 3 subunit J
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