IL_6ZCE_094
3D structure
- PDB id
- 6ZCE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast ABCE1-bound 43S pre-initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- GGU*GAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZCE_094 not in the Motif Atlas
- Geometric match to IL_8C3A_074
- Geometric discrepancy: 0.17
- The information below is about IL_8C3A_074
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
6ZCE|1|A|G|871
6ZCE|1|A|G|872
6ZCE|1|A|U|873
*
6ZCE|1|A|G|954
6ZCE|1|A|A|955
6ZCE|1|A|C|956
Current chains
- Chain A
- 18S ribosomal RNA (1719-MER)
Nearby chains
- Chain C
- 40S ribosomal protein S1-A
- Chain O
- 40S ribosomal protein S13
- Chain c
- 40S ribosomal protein S27-A
- Chain q
- Eukaryotic translation initiation factor 3 subunit C
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